1 | /********************************************************************************
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2 | * Volatile - Volume Visualization Software for SAGE
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3 | * Copyright (C) 2004 Electronic Visualization Laboratory,
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4 | * University of Illinois at Chicago
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5 | *
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6 | * All rights reserved.
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7 | *
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8 | * Redistribution and use in source and binary forms, with or without
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9 | * modification, are permitted provided that the following conditions are met:
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10 | *
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11 | * * Redistributions of source code must retain the above copyright
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12 | * notice, this list of conditions and the following disclaimer.
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13 | * * Redistributions in binary form must reproduce the above
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14 | * copyright notice, this list of conditions and the following disclaimer
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15 | * in the documentation and/or other materials provided with the distribution.
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16 | * * Neither the name of the University of Illinois at Chicago nor
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17 | * the names of its contributors may be used to endorse or promote
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18 | * products derived from this software without specific prior written permission.
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19 | *
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20 | * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
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21 | * "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
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22 | * LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
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23 | * A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR
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24 | * CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
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25 | * EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
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26 | * PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
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27 | * PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
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28 | * LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
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29 | * NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
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30 | * SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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31 | *
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32 | * Direct questions, comments etc about Volatile to www.evl.uic.edu/cavern/forum
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33 | *********************************************************************************/
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34 |
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35 | //Class vVolume: Defines the 3D volume and the associated operations
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36 | //the inherited class should override the load/roam function
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37 | //This class only manages the data(doesnt do the rendering)
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38 | //Shalini Venkataraman, Luc Renambot
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39 | //Sep 7 2003
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40 | #include <math.h>
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41 | #include <stdio.h>
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42 | #include <stdlib.h>
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43 | #include <string.h>
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44 | #include "glUE.h"
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45 | #include "vVolume.h"
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46 | #include "VectorMath.h"
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47 | #include "global.h"
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48 |
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49 | //constructor
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50 | vVolume::vVolume(int x, int y, int z) {
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51 | fileY = y;
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52 | fileX = x;
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53 | fileZ = z;
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54 | dimY = dimX = dimZ = maxDim = 128;
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55 | offsetX = offsetY = offsetZ = 0;
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56 | spacingX = spacingY = spacingZ = 1.0f;
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57 | probeX = probeY = probeZ = 0;
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58 | curVolume = numVolumes = 0;
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59 | probeValue = 0;
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60 | isoValue = 128;
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61 | }
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62 |
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63 | //destructor
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64 | vVolume::~vVolume() {
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65 | for (int i=0;i<cache.size();i++) {
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66 | delete [] cache[i].voxelData;
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67 | //delete [] cache[i].gradData;
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68 | delete [] cache[i].hist;
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69 | }
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70 | }
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71 |
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72 | void vVolume::setLoadDims(int x, int y, int z) {
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73 | //now get the power of 2
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74 | dimY = makepow2_max(y);
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75 | dimX = makepow2_max(x);
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76 | dimZ = makepow2_max(z);
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77 | maxDim = dimY;
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78 | maxDim = MAX(dimY,dimX);
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79 | maxDim = MAX(maxDim,dimZ);
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80 | probeX = dimX/2;
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81 | probeY = dimY/2;
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82 | probeZ = dimZ/2;
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83 | }
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84 |
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85 | void vVolume::probe(int dx, int dy, int dz) {
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86 | //calculate new probe(cos the orig offset is unsigned..)
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87 | int newProbeX = probeX + dx;
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88 | int newProbeY = probeY + dy;
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89 | int newProbeZ = probeZ + dz;
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90 | if (newProbeX== dimX)
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91 | newProbeX = dimX-1;
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92 | if (newProbeY== dimY)
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93 | newProbeY = dimY-1;
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94 | if (newProbeZ== dimZ)
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95 | newProbeZ = dimZ-1;
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96 |
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97 | if (newProbeX < 0)
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98 | newProbeX = 0;
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99 | if (newProbeY < 0)
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100 | newProbeY = 0;
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101 | if (newProbeZ < 0)
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102 | newProbeZ = 0;
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103 | //copy to the offset
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104 | probeX = newProbeX;
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105 | probeY = newProbeY;
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106 | probeZ = newProbeZ;
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107 | probeValue = getValue(probeZ, probeY, probeX);
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108 | }
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109 |
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110 |
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111 | int vVolume::hist2D(unsigned char *normHist)
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112 | {
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113 | float *hist = new float[H2D_DIM];
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114 | int i;
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115 | for(i=0; i<H2D_DIM; ++i){
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116 | hist[i] = 0;
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117 | }
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118 |
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119 | for(i=0; i<dimZ; ++i){
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120 | for(int j=0; j<dimY; ++j){
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121 | for(int k=0; k<dimX; ++k){
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122 | int vox = i*dimX*dimY + j*dimX + k;
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123 | hist[cache[curVolume].voxelData[vox] + cache[curVolume].gradData[vox]*256] += 1;
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124 | }
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125 | }
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126 | }
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127 |
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128 | float max = 0;
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129 | for(i = 0; i< H2D_DIM; ++i){
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130 | hist[i] = (float)log(hist[i]);
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131 | max = MAX(hist[i], max);
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132 | }
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133 | for(i=0; i< H2D_DIM; ++i){
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134 | normHist[i] = (unsigned char)(hist[i]/(float)max*255);
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135 | }
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136 | delete[] hist;
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137 | return 1;
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138 | }
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139 |
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140 | int vVolume::hist1D(unsigned char *normHist)
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141 | {
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142 | float *hist = new float[H2D_DIM];
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143 | int i;
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144 | for(i=0; i<H2D_DIM; ++i){
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145 | hist[i] = 0;
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146 | }
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147 |
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148 | for(i=0; i<dimZ; ++i){
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149 | for(int j=0; j<dimY; ++j){
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150 | for(int k=0; k<dimX; ++k){
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151 | int vox = i*dimX*dimY + j*dimX + k;
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152 | for (int row = 0;row<256;row++)
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153 | hist[cache[curVolume].voxelData[vox]+row*256] += 1;
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154 | }
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155 | }
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156 | }
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157 |
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158 | float max = 0;
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159 | for(i = 0; i< H2D_DIM; ++i){
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160 | // hist[i] = (float)log(hist[i]);
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161 | max = MAX(hist[i], max);
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162 | }
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163 | for(i=0; i< H2D_DIM; ++i){
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164 | normHist[i] = (unsigned char)(hist[i]/(float)max*255);
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165 | }
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166 | delete[] hist;
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167 | return 1;
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168 | }
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169 |
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170 | void vVolume::saveVolume(const char* prefix) {
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171 | FILE* fp;
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172 | char filename[256];
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173 | sprintf(filename,"%s%dx%dx%d.raw",prefix,dimX,dimY,dimZ);
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174 | if( (fp = fopen(filename, "wb" )) != NULL ) {
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175 | int numwritten = fwrite(cache[curVolume].voxelData, sizeof(GLubyte), dimY*dimX*dimZ, fp );
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176 | printf( "vVolume::saveVolume: Wrote %d bytes to file %s\n", numwritten, filename);
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177 | fclose( fp );
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178 | }
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179 | else
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180 | printf( "vVolume::saveVolume: Problem opening the file\n" );
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181 | }
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182 |
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183 | void vVolume::saveGradient(const char* prefix) {
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184 | FILE* fp;
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185 | char filename[256];
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186 | sprintf(filename,"%s%dx%dx%d.raw",prefix,dimX,dimY,dimZ);
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187 | if( (fp = fopen(filename, "wb" )) != NULL ) {
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188 | int numwritten = fwrite(cache[curVolume].gradData, sizeof(unsigned char), dimY*dimX*dimZ, fp );
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189 | printf( "saveGradient: Wrote %d bytes to file %s\n", numwritten, filename);
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190 | fclose( fp );
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191 | }
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192 | else
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193 | printf( "saveGradient: Problem opening the file\n" );
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194 | }
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195 |
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196 |
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