| | 1 | = Current deployment = |
| | 2 | |
| | 3 | == Local testbed - grass1 == |
| | 4 | {{{ |
| | 5 | module load muscle2/devel |
| | 6 | }}} |
| | 7 | **Limited resource. Only one node. Use PL-Grid sites instead! ** |
| | 8 | == PL-Grid sites == |
| | 9 | The PL-Grid e-infrastructure gives you access to reasonable computational power (> 230 Teraflops). You can use it both for production and test runs. If you want to debug/test your application interactively use `-I` option of the `qsub` command, e.g: |
| | 10 | {{{ |
| | 11 | [reef] /home/plgrid/plgmamonski/reef > qsub -I -q plgrid-testing |
| | 12 | qsub: waiting for job 6742856.ce.reef.man.poznan.pl to start |
| | 13 | qsub: job 6742856.ce.reef.man.poznan.pl ready |
| | 14 | |
| | 15 | [r399] /home/plgrid/plgmamonski/reef > |
| | 16 | [r399] /home/plgrid/plgmamonski/reef > module load muscle2/devel |
| | 17 | java/jdk1.6.0_23 load complete. |
| | 18 | intel/10.1 load complete. |
| | 19 | 'openmpi/current' load complete. |
| | 20 | }}} |
| | 21 | **Do not run anything computational intensive at the frontend/ui machine as your account might be banned.** |
| | 22 | === Zeus (Cyfronet - Krakow) === |
| | 23 | Add the two following line to your `.bashrc`: |
| | 24 | {{{ |
| | 25 | export QCG_SCRIPTS_DIR=/software/grid/plgrid/qcg-app-scripts/app-scripts/ |
| | 26 | . $QCG_SCRIPTS_DIR/common-mod.qcg |
| | 27 | }}} |
| | 28 | After next login you should be able to see the `muscle2` modules: |
| | 29 | {{{ |
| | 30 | $module avail muscle2 |
| | 31 | ---------------------/mnt/lustre/scratch/groups/plggmuscle/.qcg-modules ------ |
| | 32 | muscle2/devel |
| | 33 | $module load muscle2 |
| | 34 | java/current load complete. |
| | 35 | 'openmpi/current' load complete. |
| | 36 | $muscle2 --version |
| | 37 | This is the Multiscale Coupling Library and Environment (MUSCLE) 2.0 |
| | 38 | Revision: $Rev: 404 $ from $Date: 2012-06-28 15:34:05 +0200 (Thu, 28 Jun 2012) $: running in 64-bit mode |
| | 39 | }}} |
| | 40 | === Reef (PSNC - Poznan) === |
| | 41 | Like Zeus, but set: |
| | 42 | {{{ |
| | 43 | export QCG_SCRIPTS_DIR=/opt/exp_soft/plgrid/qcg-app-scripts/app-scripts/ |
| | 44 | . $QCG_SCRIPTS_DIR/common-mod.qcg |
| | 45 | }}} |
| | 46 | in your `~/.bashrc` file. |
| | 47 | === Galera (TASK - Gdansk) === |
| | 48 | Frontend machine: |
| | 49 | * ui.grid.task.gda.pl |
| | 50 | Like Zeus, but set: |
| | 51 | {{{ |
| | 52 | export QCG_SCRIPTS_DIR=/opt/exp_soft/plgrid/qcg-app-scripts/app-scripts/ |
| | 53 | . $QCG_SCRIPTS_DIR/common-mod.qcg |
| | 54 | }}} |
| | 55 | in your `~/.bashrc` file. |
