Changeset 12 for trunk/README

Timestamp:

04/20/11 17:20:29 (14 years ago)

Author:

mmamonski

Message:

version 1.0.7 release candidate

File:

• trunk/README (modified) (1 diff, 1 prop)

trunk/README

@@ -1 @@
-=================================
-DRMAA for Torque/PBS Professional
-=================================
+The manual for the DRMAA for Torque/PBS Pro (since version 1.0.7) is available 
+at the project wiki: 
 
-:Authors:       Łukasz Cieśnik <lukasz.ciesnik@fedstage.com>, 
-                                Michał Matłoka <michal.matloka@student.put.poznan.pl>, 
-                                Mariusz Mamonski <mamonski@man.poznan.pl>
-:Contact:       Mariusz Mamonski <mamonski@man.poznan.pl>
-:Date:          $Date: 2010-07-07 17:05:39 +0200 (Wed, 07 Jul 2010) $
-:Version:       1.0.3
-:Revision:      $Revision: 386 $
-:Copyright:     Copyright (C) 2006-2008 FedStage Systems
-
-:Abstract:  This document describes installation, configuration and usage
-  of `DRMAA for Torque/PBS Pro`_ library (PBS DRMAA for short).
-
-.. meta::
-  :http-equiv=Content-Language: en
-  :http-equiv=Content-Type: application/xhtml+xml; charset=UTF-8
-  :description lang=en: DRMAA implementation for PBS systems.
-  :keywords: DRMAA, PBS, Torque, PBS Professional, PBS Pro, Portable Batch System
-
-.. contents::
-
-.. default-role:: literal
-
-
-Introduction
-============
-
-DRMAA for Torque/PBS Pro is implementation of `Open Grid Forum`_ DRMAA_
-(Distributed Resource Management Application API) specification_ for
-submission and control jobs to PBS_ systems: `PBS Professional`_, Torque_
-and OpenPBS_.  Using DRMAA, grid applications builders, portal developers
-and ISVs can use the same high-level API to link their software with
-different cluster/resource management systems.
-
-This software also enables the integration of `SMOA Computing`_
-with the underlying Torque/PBS Pro system for remote multi-user job submission
-and control over Web Services.
-
-This manual can be found in HTML and PDF formats in ``doc`` directory.
-
-
-Installation
-============
-
-To compile the library just go to main source directory and type::
-
-  $ ./configure [--prefix=/installation/directory] && make
-
-If you had installed PBS in a non standard directory pass it
-in ``--with-pbs`` configure parameter.  There are no unusual requirements
-for basic usage of library: ANSI C compiler and standard make should
-suffice (if linking against PBS Professional you will need also the OpenSSL library).  
-If you have taken sources directly from SVN repository you would 
-need additional `developer tools`_. For further information regarding GNU 
-build system see the INSTALL file.
-
-For Torque_ it is advised to configure queues so jobs are leaved after
-the completion.  To achieve this simply type the following command for
-all queues which are intended to use with PBS DRMAA::
-
-  # qmgr -c "set queue QUEUE_NAME keep_completed = 60"
-
-The value of the ``keep_completed`` parameter denotes a number of
-seconds jobs will have to wait in the queue after the completion (and
-should be greater then ``pool_delay`` value in PBS DRMAA configuration_).
-It enables the DRMAA library to retrieve the information about finished
-jobs.
-
-Alternatively you can configure the DRMAA library to use Torque server daemon logs
-as information source for terminated jobs (consult next section for details) 
-
-Configuration
-=============
-
-During DRMAA session initialization (``drmaa_init``) library tries to read
-its configuration parameters from locations:
-``/etc/pbs_drmaa.conf``, ``~/.pbs_drmaa.conf`` and from file given in
-``PBS_DRMAA_CONF`` environment variable (if set to non-empty string).
-If multiple configuration sources are present then all configurations
-are merged with values from user-defined files taking precedence
-(in following order: ``$PBS_DRMAA_CONF``, ``~/.pbs_drmaa.conf``,
-``/etc/pbs_drmaa.conf``).
-
-Currently recognized configuration parameters are:
-
-  pool_delay
-    Amount of time (in seconds) between successive checks of unfinished job(s).
-
-     Type: integer, Default: 5
-
-  wait_thread
-    Value 1 enables single "wait thread" for updating jobs status. 
-    With ``pbs_home`` set enables wait_thread which reads PBS log files (instead of polling PBS daemons).
-     
-     Type: integer, Default: 0
-
-  pbs_home
-    Path to Torque/PBS Pro spool directory that contains server logs (e.g.: /var/spool/pbs).
-    
-     Type: string, Default: not set
-     
-  job_categories
-    Dictionary of job categories.  It's keys are job categories names
-    mapped to `native specification`_ strings.  Attributes set by
-    job category can be overridden by corresponding DRMAA attributes
-    or native specification.  Special category name ``default``
-    is used when ``drmaa_job_category`` job attribute was not set.
-
-  cache_job_state
-    According to the DRMAA specification every `drmaa_job_ps()` call should
-    query DRM system for job state.  With this option one may optimize
-    communication with DRM.  If set to positive integer `drmaa_job_ps()`
-    returns remembered job state without communicating with DRM for
-    `cache_job_state` seconds since last update.  By default library
-    conforms to specification (no caching will be performed).
-
-    Type: integer, default: 0
-
-
-.. table::
-  Different modes of operation
-
-  =========== ========= =========== ======================= ===================================
-  wait_thread pbs_home     mode     keep_completed needed         comments
-  =========== ========= =========== ======================= ===================================
-       0       not set   polling           yes              default configuration
-       1       not set   polling           yes              more effective than above
-       1         set     triggered         no               read access to server logs needed
-  =========== ========= =========== ======================= ===================================
-  
-
-Configuration file syntax
--------------------------
-
-Configuration file is in form a dictionary.
-Dictionary is set of zero or more key-value pairs.
-Key is a string while value could be a string, an integer
-or another dictionary.
-::
-
-  configuration: dictionary | dictionary_body
-  dictionary: '{' dictionary_body '}'
-  dictionary_body: (string ':' value ',')*
-  value: integer | string | dictionary
-  string: unquoted-string | single-quoted-string | double-quoted-string
-  unquoted-string: [^ \t\n\r:,0-9][^ \t\n\r:,]*
-  single-quoted-string: '[^']*'
-  double-quoted-string: "[^"]*"
-  integer: [0-9]+
-
-Configuration file example
---------------------------
-
-::
-  
-  # pbs_drmaa.conf - Sample pbs_drmaa configuration file.
-  
-  wait_thread: 0,
-
-  #pool_delay: 5,
-
-  job_categories: {
-        #default: "-k n", # delete output files from execution hosts
-        longterm: "-p -100 -l nice=5",
-        amd64: "-l arch=amd64",
-        python: "-l software=python",
-        java: "-l software=java,vmem=500mb -v PATH=/opt/sun-jdk-1.6:/usr/bin:/bin",
-        #test: "-u test -q testing",
-  },
-  
-
-Native specification
-====================
-
-DRMAA interface allows to pass DRM dependant job submission options.
-Those options may be specified by settings ``drmaa_native_specification``. ``drmaa_native_specification``
-accepts space delimited ``qsub``. ``qsub``
-options which does not set job attributes (`-b`, `-z`, `-C`) as
-well as meant for submission of interactive jobs (`-I`, `-X`) or
-to specify directories (`-d`, `-D`) are *not* supported.
-Also instead of `-W` option following long options are accepted
-within native specification: `--depend`, `--group-list`, `--stagein`
-and `--stageout`.  For detailed description of each option see PBS
-documentation.
-
-Attributes set in native specification overrides corresponding DRMAA job
-attributes.
-
-.. table::
-  Native specification strings with corresponding DRMAA attributes.
-
-  ===================== =============== ============ ====================
-  DRMAA attribute       PBS attribute   PBS resource native specification
-  ===================== =============== ============ ====================
-                      Attributes which get overridden                   
-  -----------------------------------------------------------------------
-  drmaa_job_name        Job_Name                     `-N` job name       
-  drmaa_output_path     Output_Path                  `-o` output path    
-  drmaa_error_path      Error_Path                   `-e` error path     
-  drmaa_join_files      Join_Path                    `-j` join options   
-  drmaa_block_email     Mail_Points                  `-m` mail options   
-  drmaa_start_time      Execution_Time               `-a` start time     
-  drmaa_js_state        Hold_Types                   `-h`                
-  ..                    Account_Name                 `-A` account string 
-  ..                    Checkpoint                   `-c` interval       
-  ..                    Keep_Files                   `-k` keep           
-  ..                    Priority                     `-p` priority       
-  ..                    destination                  `-q` queue          
-  ..                    Rerunable                    `-r` y/n            
-  ..                    Shell_Path_List              `-S` path list      
-  ..                    User_List                    `-u` user list      
-  ..                    group_list                   `--group_list=`\groups 
-  drmaa_v_env           Variable_List                `-v` variable list  
-  ..                    Variable_List                `-V`                
-  drmaa_v_email         Mail_Users                   `-M` user list      
-  drmaa_duration_hlimit Resource_List   cput         `-l cput=`\limit    
-  drmaa_wct_hlimit      Resource_List   walltime     `-l walltime=`\limit
-  ..                    Resource_List                `-l` resources      
-  ..                    depend                       `--depend=`\dependency
-  ..                    stagein                      `--stagein=`\stagein 
-  ..                    stageout                     `--stageout=`\stageout
-  ===================== =============== ============ ====================
-
-
-Release notes
-=============
-
-Changes in 1.0.5 release
-------------------------
- * make drmaa tolerant to torque restarts
- * now one can use '-lmem' in native specification attribute
-
-Changes in 1.0.4 release
-------------------------
- * fix "mtime" date parsing ('triggered' mode)
- * fix "submit_args" attribute bug (PBS Professional only)
-
-Changes in 1.0.3 release
-------------------------
-
- * new implementation of the "wait thread" which reads PBS log files (increased scalability)
- * support for native specification attribute
- * memleak fixes
- * testsuite passed on PBS Pro 10
- * exit codes 126-127 cause the drmaa_wifaborted() to return true
- * other bug fixes
-
-Changes in 1.0.2 release
-------------------------
-
- * automatic reconnect on PBS connection errors 
- * static linkage with DRMAA utilities
- * other bug fixes
- 
-Changes in 1.0.1 release
-------------------------
-
- * number of attributes implemented:
-
-   - ``drmaa_start_time``
-   - ``drmaa_duration_hlimit``
-   - ``drmaa_wct_hlimit``
-   - ``drmaa_native_specification``
-   - ``drmaa_job_category``
-
- * configuration file(s)
- * separate wait thread
- * lot of bug fixes
- * more robust code
- * separated DRMAA utilities library
- * Python driven test-suite
-
-
-Known bugs and limitations
---------------------------
-
-Library covers nearly all DRMAA 1.0 specification_ with exceptions
-listed below.  It passes the `official DRMAA test-suite`_ except of tests
-which require job termination status.  All mandatory and some optional
-job attributes (namely: transfer files, wall clock time hard limit,
-job run duration hard limit) are implemented.
-
-Known limitations imposed by PBS API:
-
- * With `PBS Pro`_ (and OpenPBS_) retrieving of job termination status is
-   impossible.  For this DRM finished jobs are marked as done with 0
-   return code unless job was terminated through library when they are
-   treated as aborted and killed after receiving SIGTERM.
-
- * Library accepts job identifiers only of those jobs which
-   were submitted under current session (specification says it should
-   also accept job identifiers from previous sessions and even of
-   jobs submitted in former execution of DRMAA enabled application).
-   This could only be partially fixed as job state needs to be kept by
-   library in order to cope with PBS shortcomings.
-
- * Job termination (when job is running) is realized by PBS
-   by sending SIGTERM and/or SIGKILL therefore retrieving
-   those signals cannot be distinguished from abort using
-   ``drmaa_control(DRMAA_CONTROL_TERMINATE)``.  Then job termination
-   state is marked as "aborted" and "signaled" whatever is the state.
-
- * ``drmaa_wcoredump()`` always returns ``false``.
-
- * Waiting functions (``drmaa_wait()`` and ``drmaa_synchronize()``)
-   must pool DRM to find out whether job finished.
-
-
-Test-suite
-----------
-
-The DRMAA for Torque/PBS Pro library was successfully tested with
-`PBS Pro`_ 10 (10.0.0.82981) and Torque_ 2.5.1 on Linux OS.  Following
-table presents results of tests from
-`Official DRMAA test-suite`_ (originally developed for Sun Grid Engine).
-
-.. table::
-  Mode - Polling
-
-  =============================================== =========== ============ 
-                  Test name                        PBS Pro 10  Torque 2.5.1 
-  =============================================== =========== ============ 
-  test_mt_exit_during_submit                        passed       passed           
-  test_mt_exit_during_submit_or_wait                passed       passed           
-  test_mt_submit_before_init_wait                   passed       passed            
-  test_mt_submit_mt_wait                            passed       passed            
-  test_mt_submit_wait                               passed       passed            
-  test_st_attribute_change                          passed       passed            
-  test_st_bulk_singlesubmit_wait_individual         passed       passed            
-  test_st_bulk_submit_in_hold_session_delete        passed       passed            
-  test_st_bulk_submit_in_hold_session_release       passed       passed            
-  test_st_bulk_submit_in_hold_single_delete         passed       passed            
-  test_st_bulk_submit_in_hold_single_release        passed       passed            
-  test_st_bulk_submit_wait                          passed       passed            
-  test_st_contact                                   passed       passed            
-  test_st_drm_system                                passed       passed            
-  test_st_drmaa_impl                                passed       passed            
-  test_st_empty_session_control                     passed       passed            
-  test_st_empty_session_synchronize_dispose         passed       passed            
-  test_st_empty_session_synchronize_nodispose       passed       passed            
-  test_st_empty_session_wait                        passed       passed            
-  test_st_error_file_failure                      FAILED [1]_    passed       
-  test_st_exit_status                             FAILED [1]_    passed       
-  test_st_input_file_failure                      FAILED [1]_    passed       
-  test_st_mult_exit                                 passed       passed        
-  test_st_mult_init                                 passed       passed         
-  test_st_output_file_failure                     FAILED [1]_    passed      
-  test_st_submit_in_hold_delete                     passed       passed         
-  test_st_submit_in_hold_release                    passed       passed         
-  test_st_submit_kill_sig                         FAILED [1]_    passed       
-  test_st_submit_polling_synchronize_timeout        passed       passed        
-  test_st_submit_polling_synchronize_zerotimeout    passed       passed        
-  test_st_submit_polling_wait_timeout               passed       passed        
-  test_st_submit_polling_wait_zerotimeout           passed       passed       
-  test_st_submit_suspend_resume_wait                passed       passed       
-  test_st_submit_wait                               passed       passed       
-  test_st_submitmixture_sync_all_dispose            passed       passed      
-  test_st_submitmixture_sync_all_nodispose          passed       passed       
-  test_st_submitmixture_sync_allids_dispose         passed       passed      
-  test_st_submitmixture_sync_allids_nodispose       passed       passed     
-  test_st_supported_attr                            passed       passed    
-  test_st_supported_vattr                           passed       passed    
-  test_st_usage_check                               passed       passed    
-  test_st_version                                   passed       passed    
-  =============================================== =========== ============ 
-
-.. [1] Due to unavailability of job termination status.
-
-.. table::
-  Mode - Triggered
-
-  =============================================== =========== ============ 
-                  Test name                        PBS Pro 10  Torque 2.5.1 
-  =============================================== =========== ============ 
-  test_mt_exit_during_submit                        passed       passed           
-  test_mt_exit_during_submit_or_wait                passed       passed           
-  test_mt_submit_before_init_wait                   passed       passed            
-  test_mt_submit_mt_wait                            passed       passed            
-  test_mt_submit_wait                               passed       passed            
-  test_st_attribute_change                          passed       passed            
-  test_st_bulk_singlesubmit_wait_individual         passed       passed            
-  test_st_bulk_submit_in_hold_session_delete        passed       passed            
-  test_st_bulk_submit_in_hold_session_release       passed       passed            
-  test_st_bulk_submit_in_hold_single_delete         passed       passed            
-  test_st_bulk_submit_in_hold_single_release        passed       passed            
-  test_st_bulk_submit_wait                          passed       passed            
-  test_st_contact                                   passed       passed            
-  test_st_drm_system                                passed       passed            
-  test_st_drmaa_impl                                passed       passed            
-  test_st_empty_session_control                     passed       passed            
-  test_st_empty_session_synchronize_dispose         passed       passed            
-  test_st_empty_session_synchronize_nodispose       passed       passed            
-  test_st_empty_session_wait                        passed       passed            
-  test_st_error_file_failure                        passed       passed         
-  test_st_exit_status                               passed       passed        
-  test_st_input_file_failure                        passed       passed        
-  test_st_mult_exit                                 passed       passed        
-  test_st_mult_init                                 passed       passed         
-  test_st_output_file_failure                       passed       passed        
-  test_st_submit_in_hold_delete                     passed       passed         
-  test_st_submit_in_hold_release                    passed       passed         
-  test_st_submit_kill_sig                           passed       passed        
-  test_st_submit_polling_synchronize_timeout        passed       passed        
-  test_st_submit_polling_synchronize_zerotimeout    passed       passed        
-  test_st_submit_polling_wait_timeout               passed       passed        
-  test_st_submit_polling_wait_zerotimeout           passed       passed       
-  test_st_submit_suspend_resume_wait                passed       passed       
-  test_st_submit_wait                               passed       passed       
-  test_st_submitmixture_sync_all_dispose            passed       passed      
-  test_st_submitmixture_sync_all_nodispose          passed       passed       
-  test_st_submitmixture_sync_allids_dispose         passed       passed      
-  test_st_submitmixture_sync_allids_nodispose       passed       passed     
-  test_st_supported_attr                            passed       passed    
-  test_st_supported_vattr                           passed       passed    
-  test_st_usage_check                               passed       passed    
-  test_st_version                                   passed       passed    
-  =============================================== =========== ============ 
-
-Developers
-==========
-
-Core functionality of DRMAA is put into ``drmaa_utils`` library.
-This library was created in order to keep consistent common functionality
-of `DRMAA for Torque/PBS Pro`_ and other DRMAA libraries.  As it is
-independent from any particular DRM you may found this library useful for
-developing other DRMAAs.
-
-Developer tools
----------------
-Although not needed for library user the following tools may be required
-if you intend to develop DRMAA for Torque/PBS Pro library or run tests:
-
- * GNU autotools (autoconf, automake, libtool),
- * Bison_ parser generator,
- * gperf_ perfect hash function generator,
- * Python_ (with development files) for Docutils_ and running test-suite
-   (at least 2.5 version but not Python 3.* which will introduce
-   incompatibilities),
- * Pyrex_ a Language for writing Python extension modules (>=0.9.6),
- * Docutils_ for processing this ``README``,
- * LaTeX_ for creating documentation in PDF format,
- * Doxygen_ for generating code documentation.
-
-.. _Bison:     http://www.gnu.org/software/bison/
-.. _gperf:     http://www.gnu.org/software/gperf/
-.. _Python:    http://www.python.org/
-.. _Pyrex:     http://www.cosc.canterbury.ac.nz/greg.ewing/python/Pyrex/
-.. _Docutils:  http://docutils.sourceforge.net/
-.. _LaTeX:     http://www.latex-project.org/
-.. _Doxygen:   http://www.stack.nl/~dimitri/doxygen/
-
-
-
-Contact
-=======
-
-The DRMAA library for Torque and PBSPro is curently maintained by `Poznan Supercomputing and Networking Center`_. Please send 
-your comments, questions and bug reports to: 
-
-   Mariusz Mamonski <mamonski@man.poznan.pl>
-
-
-
-
-.. _DRMAA: http://drmaa.org/
-.. _Open Grid Forum: http://www.gridforum.org/
-.. _specification: http://www.ogf.org/documents/GFD.22.pdf
-.. _Official DRMAA test-suite: http://www.drmaa.org/wiki/index.php?pagename=DrmaaTestsuite
-.. _FedStage DRMAA for PBS Pro:
-  http://www.fedstage.com/wiki/FedStage_DRMAA_for_PBS_Pro
-.. _PBS DRMAA: http://www.fedstage.com/wiki/FedStage_DRMAA_for_PBS_Pro
-.. _FedStage Computing: http://www.fedstage.com/wiki/FedStage_Computing
-.. _PBS: http://en.wikipedia.org/wiki/Portable_Batch_System
-.. _PBS Professional: http://www.pbsgridworks.com/
-.. _PBS Pro: http://www.pbsgridworks.com/
-.. _Torque: http://www.clusterresources.com/pages/products/torque-resource-manager.php
-.. _OpenPBS: http://www.openpbs.org/
-.. _Poznan Supercomputing and Networking Center: http://www.man.poznan.pl/online/en/
-
-
-License
-=======
-
-Copyright (C) 2006-2008 FedStage Systems
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the `GNU General Public License`_ as published
-by the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the `GNU General Public License`_
-along with this program.  If not, see <http://www.gnu.org/licenses/>.
-
-
-GNU General Public License
---------------------------
-Version 3, 29 June 2007
-
-| Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/>
-| Everyone is permitted to copy and distribute verbatim copies
-| of this license document, but changing it is not allowed.
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-2.  Basic Permissions.
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-4.  Conveying Verbatim Copies.
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-5.  Conveying Modified Source Versions.
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-     d) If the work has interactive user interfaces, each must display
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-     b) Convey the object code in, or embodied in, a physical product
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-        long as you offer spare parts or customer support for that product
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-     c) Convey individual copies of the object code with a copy of the
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-     d) Convey the object code by offering access from a designated
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-     e) Convey the object code using peer-to-peer transmission, provided
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-    
-    A "User Product" is either (1) a "consumer product", which means any
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-    source code form), and must require no special password or key for
-    unpacking, reading or copying.
-    
-7.  Additional Terms.
-    
-    "Additional permissions" are terms that supplement the terms of this
-    License by making exceptions from one or more of its conditions.
-    Additional permissions that are applicable to the entire Program shall
-    be treated as though they were included in this License, to the extent
-    that they are valid under applicable law.  If additional permissions
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-    
-    When you convey a copy of a covered work, you may at your option
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-    it.  (Additional permissions may be written to require their own
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-    add to a covered work, you may (if authorized by the copyright holders of
-    that material) supplement the terms of this License with terms:
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-     a) Disclaiming warranty or limiting liability differently from the
-        terms of sections 15 and 16 of this License; or
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-        author attributions in that material or in the Appropriate Legal
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-    All other non-permissive additional terms are considered "further
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-    a further restriction but permits relicensing or conveying under this
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-8.  Termination.
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-    You may not propagate or modify a covered work except as expressly
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-    this License (including any patent licenses granted under the third
-    paragraph of section 11).
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-    However, if you cease all violation of this License, then your
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-    your receipt of the notice.
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-    Termination of your rights under this section does not terminate the
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-    material under section 10.
-    
-9.  Acceptance Not Required for Having Copies.
-    
-    You are not required to accept this License in order to receive or
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-    occurring solely as a consequence of using peer-to-peer transmission
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-10. Automatic Licensing of Downstream Recipients.
-    
-    Each time you convey a covered work, the recipient automatically
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-    
-    An "entity transaction" is a transaction transferring control of an
-    organization, or substantially all assets of one, or subdividing an
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-    (including a cross-claim or counterclaim in a lawsuit) alleging that
-    any patent claim is infringed by making, using, selling, offering for
-    sale, or importing the Program or any portion of it.
-    
-11. Patents.
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-    A "contributor" is a copyright holder who authorizes use under this
-    License of the Program or a work on which the Program is based.  The
-    work thus licensed is called the contributor's "contributor version".
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-    A contributor's "essential patent claims" are all patent claims
-    owned or controlled by the contributor, whether already acquired or
-    hereafter acquired, that would be infringed by some manner, permitted
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-    but do not include claims that would be infringed only as a
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-    
-    In the following three paragraphs, a "patent license" is any express
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-    If you convey a covered work, knowingly relying on a patent license,
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-    covered work in a country, or your recipient's use of the covered work
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-    work and works based on it.
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-    A patent license is "discriminatory" if it does not include within
-    the scope of its coverage, prohibits the exercise of, or is
-    conditioned on the non-exercise of one or more of the rights that are
-    specifically granted under this License.  You may not convey a covered
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-    in the business of distributing software, under which you make payment
-    to the third party based on the extent of your activity of conveying
-    the work, and under which the third party grants, to any of the
-    parties who would receive the covered work from you, a discriminatory
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-    contain the covered work, unless you entered into that arrangement,
-    or that patent license was granted, prior to 28 March 2007.
-    
-    Nothing in this License shall be construed as excluding or limiting
-    any implied license or other defenses to infringement that may
-    otherwise be available to you under applicable patent law.
-    
-12. No Surrender of Others' Freedom.
-    
-    If conditions are imposed on you (whether by court order, agreement or
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-    excuse you from the conditions of this License.  If you cannot convey a
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-    to collect a royalty for further conveying from those to whom you convey
-    the Program, the only way you could satisfy both those terms and this
-    License would be to refrain entirely from conveying the Program.
-    
-13. Use with the GNU Affero General Public License.
-    
-    Notwithstanding any other provision of this License, you have
-    permission to link or combine any covered work with a work licensed
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-    License will continue to apply to the part which is the covered work,
-    but the special requirements of the GNU Affero General Public License,
-    section 13, concerning interaction through a network will apply to the
-    combination as such.
-    
-14. Revised Versions of this License.
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-    The Free Software Foundation may publish revised and/or new versions of
-    the GNU General Public License from time to time.  Such new versions will
-    be similar in spirit to the present version, but may differ in detail to
-    address new problems or concerns.
-    
-    Each version is given a distinguishing version number.  If the
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-    option of following the terms and conditions either of that numbered
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-    Foundation.  If the Program does not specify a version number of the
-    GNU General Public License, you may choose any version ever published
-    by the Free Software Foundation.
-    
-    If the Program specifies that a proxy can decide which future
-    versions of the GNU General Public License can be used, that proxy's
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-    to choose that version for the Program.
-    
-    Later license versions may give you additional or different
-    permissions.  However, no additional obligations are imposed on any
-    author or copyright holder as a result of your choosing to follow a
-    later version.
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-15. Disclaimer of Warranty.
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-    THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY
-    APPLICABLE LAW.  EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT
-    HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM "AS IS" WITHOUT WARRANTY
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-16. Limitation of Liability.
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-17. Interpretation of Sections 15 and 16.
-    
-    If the disclaimer of warranty and limitation of liability provided
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-    reviewing courts shall apply local law that most closely approximates
-    an absolute waiver of all civil liability in connection with the
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-
-END OF TERMS AND CONDITIONS
-
-How to Apply These Terms to Your New Programs
-.............................................
-
-If you develop a new program, and you want it to be of the greatest
-possible use to the public, the best way to achieve this is to make it
-free software which everyone can redistribute and change under these terms.
-
-To do so, attach the following notices to the program.  It is safest
-to attach them to the start of each source file to most effectively
-state the exclusion of warranty; and each file should have at least
-the "copyright" line and a pointer to where the full notice is found.
-::
-
-    <one line to give the program's name and a brief idea of what it does.>
-    Copyright (C) <year>  <name of author>
-
-    This program is free software: you can redistribute it and/or modify
-    it under the terms of the GNU General Public License as published by
-    the Free Software Foundation, either version 3 of the License, or
-    (at your option) any later version.
-
-    This program is distributed in the hope that it will be useful,
-    but WITHOUT ANY WARRANTY; without even the implied warranty of
-    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-    GNU General Public License for more details.
-
-    You should have received a copy of the GNU General Public License
-    along with this program.  If not, see <http://www.gnu.org/licenses/>.
-
-Also add information on how to contact you by electronic and paper mail.
-
-If the program does terminal interaction, make it output a short
-notice like this when it starts in an interactive mode::
-
-    <program>  Copyright (C) <year>  <name of author>
-    This program comes with ABSOLUTELY NO WARRANTY; for details type `show w'.
-    This is free software, and you are welcome to redistribute it
-    under certain conditions; type `show c' for details.
-
-The hypothetical commands ``show w`` and ``show c`` should show the
-appropriate parts of the General Public License.  Of course, your
-program's commands might be different; for a GUI interface, you would
-use an "about box".
-
-You should also get your employer (if you work as a programmer) or school,
-if any, to sign a "copyright disclaimer" for the program, if necessary.
-For more information on this, and how to apply and follow the GNU GPL, see
-<http://www.gnu.org/licenses/>.
-
-The GNU General Public License does not permit incorporating your program
-into proprietary programs.  If your program is a subroutine library, you
-may consider it more useful to permit linking proprietary applications with
-the library.  If this is what you want to do, use the GNU Lesser General
-Public License instead of this License.  But first, please read
-<http://www.gnu.org/philosophy/why-not-lgpl.html>.
-
-
-
-.. role:: raw-html(raw)
-  :format: html
-.. role:: raw-latex(raw)
-  :format: latex
-.. |--|   unicode:: U+02013 .. en dash
-  :trim:
-.. |---|  unicode:: U+02014 .. em dash
-.. |LaTeX| replace:: :raw-html:`LaTeX` :raw-latex:`\LaTeX{}`
-
-.. vim: ft=rest
-.. vim700: spell spelllang=en
+  http://apps.man.poznan.pl/trac/pbs-drmaa/wiki